Лаборатория структурной, функциональной и сравнительной геномики

Лаборатория структурной, функциональной и сравнительной геномики создана в Новосибирском государственном университете и является частью Стратегической академической единицы Синтетическая биология

 

5-100_logo.jpgРеализуется в рамках проекта по повышению конкурентоспособности российских вузов 5-100

 
 
Жимулев Игорь Федорович
Заведующий лабораторией

Curriculum vitae

Сотрудники: 

        ФИО Ученая степень Контакты
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Жимулев Игорь Федорович дбн zhimulevatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Графодатский Александр Сергеевич дбн grafatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Таранин Александр Владимирович дбн taraninatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Трифонов Владимир Александрович кбн vladatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Горчаков Андрей Александрович кбн gorchakovatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Романенко Светлана Анатольевна кбн rosaatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Перельман Полина Львовна кбн  
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Коряков Дмитрий Евгеньевич кбн koryakovatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Шлома Виктор Владимирович кбн shlomaatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Пиндюрин Алексей Валерьевич кбн a [dot] pindyurinatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg eLIBRARY_logo.png Белякин Степан Николаевич кбн belyakinatmcb [dot] nsc [dot] ru
Направления исследований: 

  • структурно-функциональная организация хромосом
  • кластерная организация генов
  • молекулярная организация гетерохроматина животных и растений
  • разработка системы для внесения направленных модификаций в геном
  • организация и эволюция хромосом и геномов позвоночных
  • палеогеномика
  • структура добавочных хромосом
  • хромосомные системы определения пола
  • функциональный и эволюционный анализ геномной компоненты иммунной системы

 

ПУБЛИКАЦИИ: 

  1. Strunov A, Boldyreva LV, Andreyeva EN, Pavlova GA, Popova JV, Razuvaeva AV, Anders AF, Renda F, Pindyurin AV, Gatti M, Kiseleva E. Ultrastructural analysis of mitotic Drosophila S2 cells identifies distinctive microtubule and intracellular membrane behaviors. (doi: 10.1186/s12915-018-0528-1) BMC Biol 16: 68, 2018
    (IF = 5.770)

  2. Guselnikov SV, Baranov KO, Najakshin AM, Mechetina LV, Chikaev NA, Makunin AI, Kulemzin SV, Andreyushkova DA, Stöck M, Wuertz S, Gessner J, Warren WC, Schartl M, Trifonov VA, Taranin AV. Diversity of immunoglobulin light chain genes in non-teleost ray-finned fish uncovers IgL subdivision into five ancient isotypes. Front Immunol 9: 1079, 2018
    (IF = 5.511)

  3. Laktionov PP, Maksimov DA, Romanov SE, Antoshina PA, Posukh OV, White‑Cooper H, Koryakov DE, Belyakin SN. Genome‑wide analysis of gene regulation mechanisms during Drosophila spermatogenesis. Epigenetics Chromatin 11: 14, 2018
    (IF = 5.351)

  4. Kulemzin SV, Gorchakov AA, Chikaev AN, Kuznetsova VV, Volkova OY, Matvienko DA, Petukhov AV, Zaritskey AY, Taranin AV. VEGFR2-specific FnCAR effectively redirects the cytotoxic activity of T cells and YT NK cells. Oncotarget 9(10): 9021-9029, 2018
    (IF = 5.168)

  5. Perelman PL, Pichler R, Gaggl A, Larkin DM, Raudsepp T, Alshanbari F, Holl HM, Brooks SA, Burger PA, Periasamy K. Construction of two whole genome radiation hybrid panels for dromedary (Camelus dromedarius): 5000RAD and 15000RAD. (doi: 10.1038/s41598-018-20223-5) Sci Reports 8: 1982, 2018
    (IF = 4.122)

  6. Capozzi O, Stanyon R, Archidiacono N, Ishida T, Romanenko SA, Rocchi M. Rapid emergence of independent “chromosomal lineages” in silvered-leaf monkey triggered by Y/autosome translocation. (doi: 10.1038/s41598-018-21509-4) Sci Reports 8: 3250, 2018
    (IF = 4.122)

  7. Makunin AI, Rajičić M, Karamysheva TV, Romanenko SA, Druzhkova AS, Blagojević J, Vujošević M, Rubtsov NB, Graphodatsky AS, Trifonov VA. Low-pass single-chromosome sequencing of human small supernumerary marker chromosomes (sSMCs) and Apodemus B chromosomes.  (doi: 10.1007/s00412-018-0662-0) Chromosoma 127(3): 301–311, 2018
    (IF = 4.021)

  8. Ogienko AA, Yarinich LA, Fedorova EV, Lebedev MO, Andreyeva EN, Pindyurin AV, Baricheva EM. New slbo-Gal4 driver lines for the analysis of border cell migration during Drosophila oogenesis. Chromosoma, 2018, doi: 10.1007/s00412-018-0676-7
    (IF = 4.021)

  9. Komissarov A, Vij S, Yurchenko A, Trifonov V, Thevasagayam N, Saju J, Sridatta PSR, Purushothaman K, Graphodatsky A, Orbán L, Kuznetsova I. B chromosomes of the Asian seabass (Lates calcarifer) contribute to genome variations at the level of individuals and populations. Genes 9(10): 464, 2018
    (IF = 3.191)

  10. Singh PB, Belyakin SN. L chromosome behaviour and chromosomal imprinting in Sciara coprophila. (doi: 10.3390/genes9090440) Genes 9(9): 440, 2018
    (IF = 3.191)

  11. Makunin AI, Romanenko SA, Beklemisheva VR, Perelman PL, Druzhkova AS, Petrova KO, Prokopov DY, Chernyaeva EN, Johnson JL, Kukekova AV, Yang F, Ferguson-Smith MA, Graphodatsky AS, Trifonov VA. Sequencing of supernumerary chromosomes of red fox and raccoon dog confirms a non-random gene acquisition by B chromosomes. (doi: 10.3390/genes9080405) Genes 9(8): 405, 2018
    (IF = 3.191)

  12. Proskuryakova AA, Kulemzina AI, Perelman PL, Serdukova NA, Ryder OA, Graphodatsky AS. The case of X and Y localization of nucleolus organizer regions (NORs) in Tragulus javanicus (Cetartiodactyla, Mammalia). (doi: 10.3390/genes9060312) Genes 9(6): 312, 2018
    (IF = 3.191)

  13. Bikchurina TI, Tishakova KV, Kizilova EA, Romanenko SA, Serdyukova NA, Torgasheva AA, Borodin PM. Chromosome synapsis and recombination in male-sterile and female-fertile interspecies hybrids of the dwarf hamsters (Phodopus, Cricetidae). (doi:10.3390/genes9050227) Genes 9(5): 227, 2018
    (IF = 3.191)

  14. Pokholkova GV, Demakov SA, Andreenkov OV, Andreenkova NG, Volkova EI, Belyaeva ES, Zhimulev IF. Tethering of CHROMATOR and dCTCF proteins results in decompaction of condensed bands in the Drosophila melanogaster polytene chromosomes but does not affect their transcription and replication timing. (doi: 10.1371/journal.pone.0192634) PLoS ONE 13(4): e0192634, 2018
    (IF = 2.766)

  15. Kolesnikova TD, Goncharov FP, Zhimulev IF. Similarity in replication timing between polytene and diploid cells is associated with the organization of the Drosophila genome. (doi: 10.1371/journal.pone.0195207) PLoS ONE 13(4): e0195207, 2018
    (IF = 2.766)

  16. Reshetnikova E, Guselnikov S, Volkova O, Baranov K, Taranin A, Mechetina L. B cell-specific protein FCRLA is expressed by plasmacytoid dendritic cells in humans. (doi: 10.1002/cyto.b.21611) Cytometry B Clin Cytom 94(4): 549-704, 2018
    (IF = 2.757)

  17. Kichigin IG, Lisachov AP, Giovannotti M, Makunin AI, Kabilov MR, O’Brien PCM, Ferguson-Smith MF, Graphodatsky AS, Trifonov VA. First report on B chromosome content in a reptilian species: the case of Anolis carolinensisMol Genet Genomics, 2018, doi: 10.1007/s00438-018-1483-9 
    (IF = 2.734)

  18. Sato E, Zaboronok A, Yamamoto T, Nakai K, Taskaev S, Volkova O, Mechetina L, Taranin A, Kanygin V, Isobe T, Mathis BJ, Matsumura A. Radiobiological response of U251MG, CHO-K1 and V79 cell lines to accelerator-based boron neutron capture therapy. J Radiat Res 59(2): 101-107, 2018
    (IF = 2.031)

  19. Pavlova SV, Biltueva LS, Romanenko SA, Lemskaya NA, Shchinov AV, Abramov AV, Rozhnov VV. First cytogenetic analysis of lesser gymnures (Mammalia, Galericidae, Hylomys) from Vietnam. (doi: 10.3897/CompCytogen.v12i3.27207) Comp Cytogen 12(3): 361-372, 2018
    (IF = 1.319)

  20. Khoroshko VA, Zykova TY, Popova OO, Zhimulev IF. Border structure of intercalary heterochromatin bands of Drosophila melanogaster polytene chromosomes. (doi: 10.1134/S1607672918020163) Dokl Biochem Biophys 479(1): 114-117, 2018
    (IF = 0.610)

  21. Pobedintseva MA, Makunin AI, Kichigin IG, Kulemzina AI, Serdyukova NA, Romanenko SA, Vorobieva NV, Interesova EA, Korentovich MA, Zaytsev VF, Mischenko AV, Zadelenov VA, Yurchenko AA, Sherbakov DYu, Graphodatsky AS, Trifonov VA. Population genetic structure and phylogeography of sterlet (Acipenser ruthenus, Acipenseridae) in the Ob and Yenisei river basins. Mitochondrial DNA Part A, 2018, doi: 10.1080/24701394.2018.1467409
    (IF = 0.575)

  22. Kukekova AV,... Serdyukova NA,... Beklemischeva V,... Perelman PL, Graphodatsky AS,... Zhang G. Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours. (doi: 10.1038/s41559-018-0611-6) Nature Ecol Evol 2: 1479-1491, 2018 

Публикации за 2014-2017