Department of the Regulation of Genetic Processes

Laboratory of Cell Division

Pindyurin Alexey
Head of the Laboratory

Curriculum vitae

Staff: 
      Name Position Academic
degree
Contacts
thomson_logo.gif scopus_logo.jpg Pindyurin Alexey head PhD (Biology) a [dot] pindyurinatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg   Lebedeva Lidia senior research fellow DSc (Biology) lilatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Andreyeva Evgeniya senior research fellow PhD (Biology) andreevaatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Boldyreva Lidiya senior research fellow PhD (Biology) asdatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Omelina Evgeniya senior research fellow PhD (Biology) omelinaatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Kopyl Sergei research fellow PhD (Biology) kopylatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Dubatolova Tatiana research fellow   tdubatatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Ivankina Elena junior research fellow   zotkevichatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Yarinich Lyubov junior research fellow   l [dot] yarinichatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg Ivankin Anton research assistant   anton [dot] ivankinatgmail [dot] com
thomson_logo.gif scopus_logo.jpg Galimova Juliya research assistant    
      Pavlova Gera research assistant   gera [dot] pavlovaatmcb [dot] nsc [dot] ru
thomson_logo.gif scopus_logo.jpg   Anders (Munzarova) Alina research assistant   alina [dot] munzarovaatmcb [dot] nsc [dot] ru
      Razuvaeva Alena research assistant   alena [dot] razuvaevaatmcb [dot] nsc [dot] ru
thomson_logo.gif     Popova Julia research assistant   popovaatmcb [dot] nsc [dot] ru
thomson_logo.gif     Leshchenko Anna research assistant    
      Lebedev Mikhail research assistant   m [dot] lebedevatmcb [dot] nsc [dot] ru
      Lepekhina Tatiana lab technician    
      Yushkova Anastassiya lab technician    
thomson_logo.gif scopus_logo.jpg Ogienko Anna part-time junior research fellow PhD (Biology)  
thomson_logo.gif scopus_logo.jpg Kozhevnikova Elena part-time junior research fellow PhD (Biology)  
      Maltseva Svetlana      

Former research workers

Kiseleva Elena, PhD
Strunov Anton, PhD

Recent publications: 
  1. Gurova OA, Dubatolova TD, Shlyakhova EV, Omelyanchuk LV, Okotrub AV. Hyperthermal effect of infrared irradiation on aqueous dispersion of carbon nanotubes and their penetration into Drosophila melanogaster larvae. Phys Status Solidi B, 2017, doi: 10.1002/pssb.201700264

  2. Pindyurin AV. Genome-wide cell type-specific mapping of in vivo chromatin protein binding using an FLP-inducible DamID system in DrosophilaFunctional Genomics. Methods and Protocols. (eds. M Kaufmann, C Klinger, F Savelsbergh). 3rd ed. 392 p. Humana Press, New York, USA. Series volume 1654, 2017. pp. 99-124

  3. Ilyin AA, Ryazansky SS, Doronin SA, Olenkina OM, Mikhaleva EA, Yakushev EY, Abramov YA, Belyakin SN, Ivankin AV, Pindyurin AV, Gvozdev VA, Klenov MS, Shevelyov YY. Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells. Nucleic Acids Res 45(13): 7666-7680, 2017

  4. Renda F, Pellacani C, Strunov A, Bucciarelli E, Naim V, Bosso G, Kiseleva E, Bonaccorsi S, Sharp DJ, Khodjakov A, Gatti M, Somma MP. The Drosophila orthologue of the INT6 oncoprotein regulates mitotic microtubule growth and kinetochore structure. PLoS Genet 13(5): e1006784, 2017

  5. Andreyeva EN, Bernardo TJ, Kolesnikova TD, Lu X, Yarinich LA, Bartholdy BA, Guo X, Posukh OV, Healton S, Willcockson MA, Pindyurin AV, Zhimulev IF, Skoultchi AI, Fyodorov DV. Regulatory functions and chromatin loading dynamics of linker histone H1 during endoreplication in DrosophilaGenes Dev 31: 603-616, 2017

  6. Omelyanchuk LV, Munzarova AF. Theoretical model of mitotic spindle microtubule growth for FRAP curve interpretation. BMC Syst Biol 11(Suppl 1): 3, 2017

  7. Boldyreva LV, Goncharov FP, Demakova OV, Zykova TYu, Levitsky VG, Kolesnikov NN, Pindyurin AV, Semeshin VF, Zhimulev IF. Protein and genetic composition of four chromatin types in Drosophila melanogaster cell lines. Curr Genomics 18(2): 214-226, 2017

  8. Renda F, Pellacani C, Strunov A, Bucciarelli E, Naim V, Bosso G, Kiseleva E, Bonaccorsi S, Sharp DJ, Khodjakov A, Gatti M, Somma MP. The Drosophila orthologue of the INT6 onco-protein regulates mitotic microtubule dynamics and kinetochore structure. Mol Biol Cell 27(25): 3947 (P204), 2016

  9. Strunov A, Boldyreva LV, Pavlova GA, Pindyurin AV, Gatti M, Kiseleva E. A simple and effective method for ultrastructural analysis of mitosis in Drosophila S2 cells. MethodsX 3: 551-559, 2016

  10. Munzarova A, Popova J, Razuvaeva A, Shloma V, Gatti M, Omelyanchuk L. Accurate measurement of poleward microtubule flux in the spindle of Drosophila S2 cells. Cell Biol Int 40: 984-990, 2016

  11. Pindyurin AV, Pagie L, Kozhevnikova EN, van Arensbergen J, van Steensel B. Inducible DamID systems for genomic mapping of chromatin proteins in Drosophila. Nucleic Acids Res 44: 5646-5657, 2016

  12. Andreyeva EN, Pechkovsky EV, Pindyurin AV, Gatti M. Pathways of spindle formation in Drosophila mitotic and meiotic cells. Цитология 58: 295-298, 2016

  13. Pavlova GA, Galimova YuA, Popova YuV, Munzarova AF, Razuvaeva AV, Alekseeva AL, Berkaeva MB, Pindyurin AV, Somma MP, Gatti M, Renda F. Factors governing the pattern of spindle microtubule regrowth after tubulin depolymerization. Цитология 58: 299-303, 2016

  14. Pindyurin AV, Gatti M. Chromosomes in the taiga. Chromosome Res 23: 641-647, 2015

  15. Zhimulev IF, Zykova TYu, Goncharov FP, Khoroshko VA, Demakova OV, Semeshin VF, Pokholkova GV, Boldyreva LV, Demidova DS, Levitsky VG, Demakov SA, Belyaeva ES. Genetic organization of interphase chromosome bands and interbands in Drosophila melanogaster.  (doi: 10.1007/s10577-014-9447-3) Chromosome Res 23: 409-410, 2015

  16. Pindyurin AV, de Jong J, Akhtar W. TRIP through the chromatin: a high throughput exploration of enhancer regulatory landscapes. Genomics 106: 171–177, 2015

  17. Yarinich LA, Burakova EA, Zakharov BA, Boldyreva EV, Babkina IN, Tikunova NV, Silnikov VN. Synthesis and structure-activity relationship of novel 1,4-Diazabicyclo[2.2.2]octane derivatives as potent antimicrobial agents. Eur J Med Chem 95: 563–573, 2015

  18. Hoskins RA,... Demakova OV, Andreyeva EN, Boldyreva LV,... Zhimulev IF,... Celniker SE. The Release 6 reference sequence of the Drosophila melanogaster genome. Genome Res 25: 445-458, 2015

  19. Pokholkova GV, Koryakov DE, Pindyurin AV, Kozhevnikova EN, Belyakin SN, Andreyenkov OV, Belyaeva ES, Zhimulev IF. Tethering of SUUR and HP1 proteins results in delayed replication of euchromatic regions in Drosophila melanogaster polytene chromosomes. Chromosoma 124: 209-220, 2015

  20. Bgatova N, Dubatolova T, Omelyanchuk L, Plyusnina E, Shaposhnikov M, Moskalev A. Gadd45 expression correlates with age dependent neurodegeneration in Drosophila melanogasterBiogerontology 16: 53-61, 2015

  21. Palchikova IG, Ivankina EA, Semeshin VF, Omelyanchuk LV, Zhimulev IF, Smirnov ES. DNA Feulgen cytophotometry and chromatin diminution. In: International Multidisciplinary Microscopy Congress: Proceedings of InterM, Antalya, Turkey, October 10-13, 2013 (eds. Polychroniadis EK, Oral AY, Ozer M). Springer-Verlag Berlin Heidelberg, pp 233-239, 2014

  22. Nordman JT, Kozhevnikova EN, Verrijzer CP, Pindyurin AV, Andreyeva EN, Shloma VV, Zhimulev IF, Orr-Weaver TL. DNA copy-number control through inhibition of replication fork progression. Cell Reports 9: 841–849, 2014

  23. Akhtar W, Pindyurin AV, de Jong J, Pagie L, ten Hoeve J, Berns A, Wessels LFA, van Steensel B, van Lohuizen M. Using TRIP for genome-wide position effect analysis in cultured cells. Nature Protocols 9: 1255–1281, 2014

  24. Zhimulev IF, Zykova TYu, Goncharov FP, Khoroshko VA, Demakova OV, Semeshin VF, Pokholkova GV, Boldyreva LV, Demidova DS, Babenko VN, Demakov SA, Belyaeva ES. Genetic organization of interphase chromosome bands and interbands in Drosophila melanogaster. PLoS ONE 9(7): e101631, 2014

  25. Kolesnikova TD, Posukh OV, Andreyeva EN, Bebyakina DS, Ivankin AV, Zhimulev IF. Drosophila SUUR protein associates with PCNA and binds chromatin in a cell cycle-dependent manner. Chromosoma 122: 55-66, 2013

  26. Kopyl SA, Omelyanchuk LV. A dose-sensitive modifier of the of Drosophila melanogaster ectopic eye. Cent Eur J Biol 8: 252-258, 2013

  27. Dubatolova TD, Volkova EI, Omelyanchuk LV. Drosophila splicing factor SF2 knock-down mutant shows altered cell cycle in vivo. Cell Biol Int 37: 187-190, 2013

  28. Dolgova EV, Proskurina AS, Nikolin VP, Popova NA, Alyamkina EA, Orishchenko KE, Rogachev VA, Efremov YR, Dubatolova TD, Prokopenko AV, Chernykh ER, Ostanin AA, Taranov OS, Omigov VV, Zagrebelniy SN, Bogachev SS, Shurdov MA. “Delayed death” phenomenon: a synergistic action of cyclophosphamide and exogenous DNA. Gene 495: 134-145, 2012

Selected talks: 
  1. Pindyurin A. Efficient delivery of transgenes to cultured Drosophila cells. 13th International conference on Drosophila heterochromatin, June 4-10, 2017, Cagliari, Italy

  2. Pindyurin AV. Cell type-specific mapping of genomic binding sites of chromatin proteins using FLP-inducible DamID systems in Drosophila. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  3. Boldyreva LV. A point deletion in a region immediately downstream of GFP reporter 3′ UTR increases level of GFP transcription in mouse and human cells two-fold. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  4. Yarinich LA. Adaptation of the piggyBac transposon system to study position effects in cultured Drosophila cells. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  5. Munzarova AF. Measuring microtubule flux using the modification of a standard photobleaching-based method. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  6. Razuvaeva AV. Analysis of the involvement of kinesin-like proteins in cell division of Drosophila S2 cells. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  7. Popova JV. Role of Eb1, Mars, Mast and Mei-38 proteins in kinetochore-driven microtubule growth in Drosophila S2 cells. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  8. Pavlova GA. Role of the minus-end binding proteins in kinetochore-driven microtubule growth. International mini-conference "Chromosomes and Mitosis – 2016", November 25, 2016, Novosibirsk

  9. Pindyurin AV. A TRIP through the genome: a high-throughput method to study the influence of chromatin context on gene regulation. 10th Dutch Chromatin Meeting. 24 October 2012, Amsterdam, Netherlands

  10. Andreyeva EN. The SUUR protein affects late replicating chromatin domains in Drosophila melanogaster. Meeting on Eukaryotic DNA replication and genome maintenance, 5-9 September 2007, Cold Spring Harbor, New York, USA